MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4039_ses-1_T1w.
  • Date and time: 2022-11-02, 19:15.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5624367131670334
cnr2.3268838894296766
efc0.5620602664345943
fber1121.1867598891408
fwhmavg3.9706266666666665
fwhmx3.84872
fwhmy4.57225
fwhmz3.49091
icvscsf0.23442958563991553
icvsgm0.40751248943020213
icvswm0.35805792492988237
inumed1.903365135192871
inurange0.8466390728950504
qi10.0
qi20.0024791038018975925
rpvecsf27.197997883517537
rpvegm15.292362675574148
rpvewm20.475279844912762
sizex176
sizey256
sizez256
snrcsf3.9719068351435523
snrgm10.57055489713993
snrtotal11.015888210415618
snrwm18.50520289896337
snrdcsf29.77627056737797
snrdgm70.17098413741368
snrdtotal63.12810922865962
snrdwm89.43707298118721
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk63.75898320147731
summarybgmad7.325290743755793
summarybgmean17.1710611726098
summarybgmedian14.575458895415068
summarybgn2199498.0
summarybgp054.842016853392124
summarybgp9536.11749305948615
summarybgstdv11.903344808158913
summarycsfk1.8344351212099852
summarycsfmad68.82110653758568
summarycsfmean349.1662698673776
summarycsfmedian332.93806700594723
summarycsfn36966.0
summarycsfp05245.37414487916976
summarycsfp95523.8148181168362
summarycsfstdv83.82209792245088
summarygmk0.27659223257891385
summarygmmad69.95652660286783
summarygmmean784.1943093679562
summarygmmedian784.6043635904789
summarygmn9469.0
summarygmp05660.8858921527863
summarygmp95907.3149049893021
summarygmstdv74.22154654806305
summarywmk0.3220691635502746
summarywmmad51.20378229885299
summarywmmean1000.6253271026535
summarywmmedian1000.0247052311897
summarywmn163322.0
summarywmp05911.1885184720159
summarywmp951089.602017018944
summarywmstdv54.04002588752882
tpmoverlapcsf0.16125351190567017
tpmoverlapgm0.4292554259300232
tpmoverlapwm0.4777464270591736
wm2max0.6523385846750253
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime12:25:22.822500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0354423, 0.896509, 0.441605, 0.0573045, 0.442979, -0.894699]
ImageOrientationTextSag>Tra(-3.8)>Cor(-0.4)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0312264
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2637, 5403, -7505, 148, -89, -827, 190, -158]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp227.212
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5suma1a5ce401c755890c808eccc43b56943
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.